Taiwanese aboriginal children, Bunun village (source: Jeremy Kemp). 60-70% of Taiwanese aborigines have a loss-of-function allele at
the main hair color gene, MC1R, yet
their hair is as black as humans with the original “African” allele. This seems
to be a general pattern in Asians. They have fewer MC1R alleles than do Europeans, and the ones they have produce the
same hair color.
When I first wrote about the puzzle of European hair
and eye color, a common explanation was Neanderthal admixture. Modern humans
intermixed with Neanderthals in Europe, and one legacy of this intermixture is
the high prevalence of non-black hair and non-brown eyes we see in present-day
Europeans.
I was skeptical. Scientists had already retrieved
mtDNA from the remains of Neanderthals and early modern humans, and there was
no discernible genetic continuity between the two. Neanderthal admixture seemed
minor and could hardly account for the high proportion of Europeans who deviate
from the species norm of black hair and brown eyes (Frost, 2006).
With the sequencing of the Neanderthal genome, it
became apparent that some admixture had taken place, but only on the order of 1
to 4% in modern Eurasians. Neanderthals did resemble modern humans in having
the same main gene for hair color, i.e., MC1R,
but the Neanderthal allele at that gene was unlike any allele in modern humans
(Lalueza-Fox et al., 2007). Moreover, there was no evidence of the polymorphism
that exists for European hair color. The same allele was present in the two
Neanderthal individuals that had been sampled.
That seemed to be the end of the story. A new twist,
however, has been added by a recent paper. Ding et al. (2014) have found that
one of the MC1R alleles in modern humans (Val92Met) appears to be of Neanderthal
origin:
In this paper, we present evidences of Neanderthal introgression encompassing the MSH receptor gene MC1R. Furthermore, our evidences support that the derived allele at the functional variant Val92Met of MC1R (i.e., rs2228479*A) is likely of two origins: the vast majority of haplotypes carrying this allele in the human gene pool is resulted from Neanderthal introgression, while one haplotype (NA19084_a) carrying this allele may be from a recurrent mutation in the AMH linage, double recombination, or biased gene conversion.
This finding is consistent with the theory, first advanced by Gregory Cochran, that archaic admixture made it easier for modern humans to adapt to new environments. To be sure, Val92Met is only one of eleven derived MCIR alleles that exist in modern humans. But Ding et al. (2014) also believe that some of these other MC1R alleles are mosaics of Neanderthal and non-Neanderthal segments. So Neanderthal admixture may have helped European hair color to diversify by providing raw material for selection to act on.
A silent allele or a silenced allele?
By itself, Neanderthal admixture cannot explain the
unusual diversity of hair color in present-day Europeans. It simply provided
some of the raw material for this evolutionary development, and in most cases
this raw material had to undergo further changes, through mutation and
recombination, before it could become useful.
Indeed, despite being a loss-of-function allele, Val92Met
seems to produce the same black hair as the original "African"
allele. This may be seen in its geographic distribution: ~5% in Europeans, ~30%
in continental East Asians, and 60-70% in Taiwanese aborigines (Ding et al.,
2014). It has also been reported in South Asians, Papua-New Guineans, Japanese,
and Inuit (Harding et al., 2000). Ding et al. (2014) state that this allele is
associated with red hair, but the study they cite found only one individual
with Val92Met among the 21 redheads examined (Valverde et al., 1995). This
proportion is almost identical to the allele's incidence among Europeans in
general. More likely than not, that single individual owed her red hair to an
allele somewhere else on her genome.
Hair color is much less diverse in Asians, and this is
reflected in lower MC1R diversity.
Whereas Europeans have eleven MC1R
alleles, Asians have only five, and all five produce the same black hair color
(Harding et al., 2000). In short, Asians have fewer alleles and proportionately
fewer of these differ phenotypically from the ancestral African allele. It
looks as if something downstream prevents these alleles from affecting hair
color.
As I've argued elsewhere, Europe's diverse palette of
hair and eye colors is due to unusual evolutionary circumstances, i.e., intense
sexual selection of women within an ecozone (continental steppe-tundra of the
last ice age) where almost all food was obtained through long-distance hunting.
The consequently higher death rate and lower polygyny rate among hunters dried
up the pool of men available for mating and increased competition by women for
mates. Women were more strongly selected for eye-catching traits, particularly bright
or novel hues, thus creating an increasingly diverse palette of hair and eye
colors (Frost, 2006; Frost, 2014).
This ecozone was more suitable for continuous human
settlement in Europe than in northern Asia, where it was farther north and
farther removed from the moderating influence of the Atlantic. A site in
central Siberia from the last ice age has yielded human DNA that shows strong affinities with present-day Europeans
and Amerindians, but much less affinity with present-day northern Asians, who
seem to be largely the product of repeopling from the south near the end of the
last ice age (Maanasa et al., 2014). Europeans have thus better preserved the
legacy of this episode of intense sexual selection.
Perhaps the story
ends there. Present-day Asians have preserved less of that MC1R diversity and what they have preserved has less functional
significance. Or perhaps that diversity was initially functional and then
gradually ceased to be functional … because of some other selection pressure?
Perhaps, at the end of the last ice age, there was some non-black hair among
northern Asians, though much less than among Europeans. Being less common and
thus less normal, and no longer favored by intense sexual selection, there may
have been stronger social selection to eliminate deviant hair colors.
A similar kind of
social selection might explain why red hair is less common than blond hair
among Europeans, i.e., stigmatization of redheads that was
ultimately due to a mental association between red hair and menstrual blood
(Frost, 2012).
There may be a story behind these "silent
alleles."
References
Ding, Q., Y. Hu, S. Xu, C. Wang, H. Li, R. Zhang, S.
Yan, J. Wang, and L. Jin (2014). Neanderthal origin of the haplotypes carrying
the functional variant Val92Met in the MC1R in modern humans, Molecular
Biology and Evolution, published online June 10, 2014
http://mbe.oxfordjournals.org/content/early/2014/06/02/molbev.msu180.abstract
Frost, P. (2006). European hair and eye color - A case
of frequency-dependent sexual selection? Evolution and Human Behavior, 27,
85-103.
Frost, P. (2012). Why are redheads less common than
blondes? Evo and Proud, March 10
http://evoandproud.blogspot.ca/2012/03/why-are-redheads-less-common-than.html
Frost, P. (2014). The puzzle of European hair, eye,
and skin color, Advances in Anthropology, 4, 78-88.
http://www.scirp.org/journal/PaperInformation.aspx?PaperID=46104
Harding, R.M., Healy, E., Ray, A.J., Ellis, N.S.,
Flanagan, N., Todd, C., Dixon, C., Sajantila, A., Jackson, I.J., Birch-Machin,
M.A., and Rees, J.L. (2000). Evidence for variable selective pressures at MC1R.
American Journal of Human Genetics, 66, 1351-1361.
Lalueza-Fox, C., H. Römpler, D. Caramelli, C.
Stäubert, G. Catalano, D. Hughes, N. Rohland, E. Pilli, L. Longo, S. Condemi,
M. de la Rasilla, J. Fortea, A. Rosas, M. Stoneking, T. Schöneberg, J.
Bertranpetit, and M. Hofreiter. (2007).
A melanocortin 1 receptor allele suggests varying pigmentation among
Neanderthals, Science, 318 (5855), 1453-1455.
http://www.bio.davidson.edu/courses/genomics/Exams/2009/Neaderthal_pigment.pdf
Maanasa, R.,
Skoglund, P., Graf, K.E., Metspalu, M., Albrechtsen, A., Moltke, I., Rasmussen,
S., Stafford Jr, T.W., Orlando, L., Metspalu, E., Karmin, M., Tambets, K., Roots,
S., Mägi, R., Campos, P.F., Balanovska, E., Balanovsky, O., Khusnutdinova, E.,
Litvinov, S., Osipova, L.P., Fedorova, S.A., Voevoda, M.I., DeGiorgio, M.,
Sicheritz-Ponten, T., Brunak, S., Demeshchenko, S., Kivisild, T., Villems, R.,
Nielsen, R., Jakobsson, M., and Willerslev, E. (2014). Upper Palaeolithic
Siberian genome reveals dual ancestry of Native Americans. Nature, 505, 87-91.
http://cteg.berkeley.edu/~nielsen/wordpress/wp-content/uploads/2013/12/Raghavan-M.-et-al.-2013..pdf
Valverde, P., E. Healy, I. Jackson, J.L. Rees, and J.
Thody. (2005). Variants of the melanocyte-stimulating hormone receptor gene are
associated with red hair and fair skin in humans, Nature Genetics, 11,
328-330.
http://www.nature.com/ng/journal/v11/n3/abs/ng1195-328.html